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Commit b1444738 authored by Cihan Erkut's avatar Cihan Erkut
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remove post install command because it is fixed on the script files

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......@@ -11,10 +11,10 @@ options = {'modulename': 'lima'}
cellProfilerModuleVersionString='2.2.0-foss-2016b-Python-2.7.12'
homepage = 'https://git.embl.de/erkut/LiMA'
description = """This is a file transfer, image compression and analysis
description = """This is a file transfer, image compression and analysis
tool designed for LiMA experiments performed on the cube4 system.
This is a program to perform file operations and image analysis on images
acquired via automated microscopy in a liposome microarray (LiMA) experiment.
This is a program to perform file operations and image analysis on images
acquired via automated microscopy in a liposome microarray (LiMA) experiment.
It is designed to run on EMBL High-Performance Computing Cluster under the SLURM scheduler."""
toolchain = {'name': 'foss', 'version': '2016b'}
......@@ -63,9 +63,4 @@ modextrapaths={
'PATH': 'lib/python%(pyshortver)s/site-packages/lima/scripts'
}
mypyshortver = '.'.join(PythonVersion.split('.')[:2])
postinstallcmds=[
#modify run scripts: use explict version of CellProfiler module:
'cd %(installdir)s/lib/python'+mypyshortver+'/site-packages/lima/scripts && '+
'sed -i "s/\(module load CellProfiler\)/\\1\/'+cellProfilerModuleVersionString+'/g" *.sh'
]
moduleclass = 'bio'
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